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Publications & Software

10 peer-reviewed publications · 80+ citations · h-index 12

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12h-index
80+Citations
10Publications
2CRAN Packages
Software Packages

Published CRAN packages.

CRAN

OptCirClust

Fast optimal circular clustering algorithm. Published on CRAN. Associated paper in IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI).

CRAN Package → GitHub →
CRAN

CircularSilhouette

Silhouette-based cluster validation for circular data. Published on CRAN. Associated paper in IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB).

CRAN Package → GitHub →
Journal Articles

Peer-reviewed research.

012025
Co-Author

Radiation Exposure Induces Genome-Wide Alternative Splicing Events in Aedes aegypti Mosquitoes

Scientific Reports, 2025

RNA-seq analysis identifying 197 genes with differential splicing across pathways including Hippo and Notch following radiation exposure in Aedes aegypti.

022024
Co-Author

Phosphoproteomics Analyses of Aedes aegypti Fat Body Identify Radiation-Responsive Signaling Networks

2024

Proteomics study characterizing phosphorylation-based signaling changes in mosquito fat body following radiation treatment.

032023
Co-Author

Circular Silhouette and a Fast Algorithm

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2023

Designed a linear-time circular silhouette algorithm, approximately 3000× faster than the standard baseline, with a companion CRAN package (CircularSilhouette).

042021
Primary Author

Fast Optimal Circular Clustering and Applications on Round Genomes

IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI), 2021

First-author work introducing an O(KN log²N) clustering algorithm for circular genomic data (bacterial, mitochondrial, chloroplast genomes), connected to the CRAN package OptCirClust.

052019
Co-Author

EF-Index: An Efficient and Effective Clustering Quality Index

Journal of Visual Communication and Image Representation, 2019

Proposed a new cluster validity index (EF-Index) for evaluating clustering quality with improved computational efficiency.

062018
Co-Author

RASIT: A Robust Automatic Segmentation and Identification Technique

2018

Robust method for automatic segmentation and identification in image analysis tasks.

For the complete and up-to-date list of all publications, visit Google Scholar.